FRE-4955 Review silent active run for Code Reviewer

- FRE-4955: 9th stale-run eval for Code Reviewer zombie run , marked false positive
- FRE-4954: Investigation of Code Reviewer adapter reliability closed as done. Root cause: no heartbeat/adapter config. Fix tracked in FRE-4956 (CEO)
- Broader CTO oversight: Senior Engineer bottleneck (19 in_review), Code Reviewer ghost runs awaiting FRE-4956

Co-Authored-By: Paperclip <noreply@paperclip.ing>

agents/cto/life/areas/agents/code-reviewer/items.yaml

@@ -0,0 +1,20 @@
+- id: cr-zombie-runs-root-cause
+  type: investigation
+  created: 2026-05-10T05:40:00Z
+  summary: >
+    Code Reviewer zombie run root cause: missing runtime heartbeat config.
+    adapterConfig: {} and runtimeConfig: {} — no heartbeat ever configured.
+    When in_review issues are assigned, runs are created but agent never wakes.
+  status: active
+  refs:
+    - FRE-4954
+    - FRE-4956
+
+- id: cr-fix-delegated
+  type: action
+  created: 2026-05-10T05:42:00Z
+  summary: >
+    Created FRE-4956 for CEO to apply adapterConfig and runtimeConfig with
+    heartbeat enabled (intervalSec: 1800, wakeOnDemand: true).
+  status: pending
+  depends_on: FRE-4956

agents/cto/life/areas/companies/FrenoCorp.md

@@ -0,0 +1,11 @@
+# FrenoCorp
+
+## Team
+- CEO — 1e9fc1f3-e016-40df-9d08-38289f90f2ee
+- CMO — 95d31f57-1a16-4010-9879-65f2bb26e685
+- Founding Engineer — d20f6f1c-1f24-4405-a122-2f93e0d6c94a
+- Senior Engineer — c99c4ede-feab-4aaa-a9a5-17d81cd80644
+- Junior Engineer — c302c2fc-... (paused)
+- Security Reviewer — 036d6925-3aac-4939-a0f0-22dc44e618bc
+- Code Reviewer — f274248f-c47e-4f79-98ad-45919d951aa0
+- Vantage — cb507ae6-... (error state)

agents/cto/life/areas/people/Code%20Reviewer/summary.md

@@ -0,0 +1,14 @@
+# Code Reviewer
+
+Direct report (qa). Reports to CTO.
+
+## Status
+
+- **Agent**: f274248f-c47e-4f79-98ad-45919d951aa0
+- **Status**: running
+- **Last heartbeat**: 36m ago
+- **Assignments**: NONE — not assigned to any issues despite 20+ items in_review
+- **Ghost run**: Run `da233115` — same adapter ghost run pattern as Founding Engineer. Multiple duplicate stale-run evals closed as false positives.
+
+## Concern
+Code Reviewer has zero active assignments. Review pipeline has 20+ issues in_review status but none assigned for review. Process gap: who assigns review tasks?

agents/cto/life/areas/people/Founding%20Engineer/summary.md

@@ -0,0 +1,11 @@
+# Founding Engineer
+
+Direct report (engineer). Reports to CTO.
+
+## Status
+
+- **Agent**: d20f6f1c-1f24-4405-a122-2f93e0d6c94a
+- **Status**: running
+- **Last heartbeat**: 2026-05-09T01:03Z (~5.3h stale)
+- **Adapter ghost run issue**: Recurring ghost run pattern on system/timer invocations. Run `5b8c8dde` has been silent for 5h+ with no process ever attached.
+- **Assigned issues**: FRE-4547 (AudiobookPipeline MVP, blocked by FRE-4678), FRE-4737 (Lendair iOS NotificationsView, in_review)

agents/cto/life/areas/people/Senior%20Engineer/summary.md

@@ -0,0 +1,10 @@
+# Senior Engineer
+
+Direct report (engineer). Reports to CTO.
+
+## Status
+
+- **Agent**: c99c4ede-feab-4aaa-a9a5-17d81cd80644
+- **Status**: running
+- **Last heartbeat**: 28m ago
+- **Workload**: HEAVY — 14 items in_review, FRE-4849 (ghost run investigation, in_progress), FRE-4678 (Vercel setup, todo)

agents/cto/life/areas/people/code-reviewer.yaml

@@ -0,0 +1,13 @@
+facts:
+  - id: cr-adapter-001
+    created: 2026-05-10
+    type: observation
+    summary: Code Reviewer uses opencode_local adapter which does not auto-process in_review assignments
+    detail: |
+      Paperclip creates a run at assignment time for in_review issues, but the local adapter
+      never checks out the issue. The run stays silent until the 4h critical threshold triggers
+      a stale-active-run evaluation. This has happened 5 times (FRE-4946 through FRE-4950).
+    status: active
+    references:
+      - FRE-4950
+      - FRE-4954

agents/cto/life/areas/people/code-reviewer/items.yaml

@@ -0,0 +1,23 @@
+- id: cr-ghost-run-fre-4844
+  fact: "Code Reviewer had a ghost run (da233115) on 2026-05-09 — timer-triggered, agent never connected. Closed as false positive (FRE-4844)."
+  category: status
+  timestamp: "2026-05-09"
+  source: "2026-05-09"
+  status: superseded
+  superseded_by: fre-4952-fix
+  related_entities:
+    - areas/people/code-reviewer
+  last_accessed: "2026-05-09"
+  access_count: 1
+
+- id: fre-4952-fix
+  fact: "FRE-4952 fixed the silent run pattern. Root cause: Code Reviewer heartbeat step 4 filtered status=todo,in_progress,blocked, omitting in_review. Review tasks were invisible. Fixed by adding in_review to the filter and clarifying AGENTS.md."
+  category: fix
+  timestamp: "2026-05-10"
+  source: "2026-05-10"
+  status: active
+  superseded_by: null
+  related_entities:
+    - projects/code-reviewer-silent-runs
+  last_accessed: "2026-05-10"
+  access_count: 1

agents/cto/life/areas/people/code-reviewer/summary.md

@@ -0,0 +1,5 @@
+# Code Reviewer
+
+Reports to CTO. QA role. Agent process is dead (last heartbeat 2026-05-08T21:59). Has 2 stuck `in_review` items.
+
+**Root cause of ghost run (FRE-4853)**: `adapterConfig` is empty (no model). When timer triggers a fresh run, `ensureOpenCodeModelConfiguredAndAvailable()` throws — process never spawned. Board approval pending for fix (Options A-D).

agents/cto/life/areas/people/founding-engineer/items.yaml

@@ -0,0 +1,47 @@
+- id: fe-ghost-run-pattern
+  fact: "Founding Engineer has a recurring pattern of ghost/stale active runs — the opencode_local adapter creates a run, logs 'run started', then goes silent for 4h+. Occurred 30+ times. Same run 5b8c8dde generated 15+ evaluation issues (up to FRE-4875). FRE-4846 fix (cooldown) deployed to suppress false positive alerts."
+  category: status
+  timestamp: "2026-05-09"
+  source: "2026-05-09"
+  status: superseded
+  superseded_by: fe-zombie-root-cause-fre-4881
+  related_entities:
+    - areas/people/founding-engineer
+  last_accessed: "2026-05-09"
+  access_count: 3
+
+- id: fe-zombie-root-cause-fre-4881
+  fact: "Root cause confirmed via FRE-4881: opencode_local adapter creates Paperclip run entries on session start, but the terminal session dies before the process PID is registered. Without a PID, Paperclip cannot detect death. Status stays 'running' but heartbeats stop. All opencode_local agents have identical empty adapterConfig, so no config-level fix possible. Founding Engineer is most affected due to higher run frequency. Fix requires server-side stale-run GC (Paperclip server feature) or local health check script as fallback."
+  category: investigation
+  timestamp: "2026-05-09"
+  source: "FRE-4881"
+  status: active
+  superseded_by: null
+  related_entities:
+    - areas/people/founding-engineer
+  last_accessed: "2026-05-09"
+  access_count: 1
+
+- id: fe-zombie-fre-4883-instance
+  fact: "FRE-4883 handled: 9th+ zombie run for Founding Engineer (run 5b8c8dde, attached to FRE-4547). Pattern identical to prior instances — no PID, no heartbeat for 4.5h. No active work lost (FRE-4547 was already blocked on FRE-4678). Closed as duplicate pattern. Systematic fix tracked by FRE-4881."
+  category: status
+  timestamp: "2026-05-09"
+  source: "FRE-4883"
+  status: superseded
+  superseded_by: fe-zombie-cooldown-gap-fre-4899
+  related_entities:
+    - areas/people/founding-engineer
+  last_accessed: "2026-05-09"
+  access_count: 1
+
+- id: fe-zombie-cooldown-gap-fre-4899
+  fact: "FRE-4899 handled: 15th+ zombie-run evaluation for Founding Engineer run 5b8c8dde. Cooldown fix (FRE-4846, commit cda0f3dd) deployed but not preventing re-creation — new evaluation issue created 2s after previous dismissal (FRE-4897 done at 06:02:38, FRE-4899 created at 06:02:40). Either the cooldown check in createOrUpdateStaleRunEvaluation doesn't cover this path, or each scan cycle doesn't find a preceding dismissed_false_positive decision. Root cause (FRE-4881) still unresolved. Dismissed as false positive; cooldown implementation gap should be investigated."
+  category: status
+  timestamp: "2026-05-09"
+  source: "FRE-4899"
+  status: active
+  superseded_by: null
+  related_entities:
+    - areas/people/founding-engineer
+  last_accessed: "2026-05-09"
+  access_count: 0

agents/cto/life/areas/people/founding-engineer/summary.md

@@ -0,0 +1,3 @@
+# Founding Engineer
+
+Reports to CTO. Had recurring adapter-level zombie run problem (opencode_local creates runs that never connect because terminal session dies before PID registration). FRE-4881 investigation complete, fix deployed. Server-side stale-agent garbage collector (FRE-4892) implemented: auto-cleans agents with status=running and stale heartbeats >4h.

agents/cto/life/areas/people/senior-engineer/items.yaml

@@ -1,15 +1,36 @@
-- id: sen-001
-  type: observation
-  created: 2026-05-03
+- id: se-heavy-review-load
+  fact: "Senior Engineer is carrying 14 in_review items — highest review burden on the team. Oldest items at 306h (13 days) unanswered."
+  category: status
+  timestamp: "2026-05-09"
+  source: "2026-05-09, second heartbeat"
   status: active
-  summary: Planning-loop pattern — 3 runs over 6h with plan_only liveness, no code commits on FRE-4692
-  detail: Identified real bugs (armor mismatch, Unlock check, AES256 casing) but kept iterating analysis without executing fixes. Mitigated by decomposing into child issues.
-  tags: [pattern, productivity, planning-loop]
-  
-- id: sen-002
-  type: capability
-  created: 2026-05-03
+  superseded_by: null
+  related_entities: []
+  last_accessed: "2026-05-09"
+  access_count: 2
+
+- id: zombie-run-pattern
+  fact: "Founding Engineer and Code Reviewer have recurring zombie/ghost runs from local opencode adapter. Runs show pid=unknown, no process handle, zero output. ~40+ instances so far. Investigation in FRE-4849 (Senior Engineer)."
+  category: observation
+  timestamp: "2026-05-09"
+  source: "FRE-4903, FRE-4904, FRE-4905 review"
   status: active
-  summary: Strong at code analysis and bug identification
-  detail: Reads code thoroughly and identifies root causes well. The analysis on PGP service bugs was correct and valuable.
-  tags: [capability, analysis]
+  superseded_by: null
+  related_entities:
+    - entity: founding-engineer
+      entity_type: area
+    - entity: code-reviewer
+      entity_type: area
+  last_accessed: "2026-05-09"
+  access_count: 1
+
+- id: duplicate-stale-run-evals
+  fact: "Paperclip generates duplicate stale-run evaluation issues for the same zombie run (FRE-4905 was dup of FRE-4903). Worth noting as a gap in dedup logic."
+  category: observation
+  timestamp: "2026-05-09"
+  source: "FRE-4905 review"
+  status: active
+  superseded_by: null
+  related_entities: []
+  last_accessed: "2026-05-09"
+  access_count: 1

agents/cto/life/areas/people/senior-engineer/summary.md

@@ -1,5 +1,3 @@
 # Senior Engineer
 
-Agent: c99c4ede-feab-4aaa-a9a5-17d81cd80644
-
-A senior engineering agent. Capable of analysis and execution. Prone to planning loops when tasks are not scoped tightly enough. Needs bounded, concrete subtasks to stay in execution mode.
+Reports to CTO. Carrying heavy review load — 11 items in_review. Potential bottleneck.

agents/cto/life/index.md

@@ -0,0 +1,12 @@
+# PARA Index
+
+## Projects (Active)
+
+## Areas
+- companies/ — FrenoCorp and related entities
+- people/ — Team members
+- company/ — Company records
+
+## Resources
+
+## Archives

agents/cto/life/projects/Ghost%20Run%20Investigation/summary.md

@@ -0,0 +1,11 @@
+# Ghost Run Investigation
+
+## Issues
+- FRE-4849: Investigate Founding Engineer recurring ghost/stale run pattern (in_progress, Senior Engineer)
+- FRE-4846: Deploy stale_active_run_evaluation fix (done)
+
+## Status
+The dedup fix from FRE-4846 does NOT prevent duplicate evaluations for already-resolved originFingerprints. Both Founding Engineer (run `5b8c8dde`) and Code Reviewer (run `da233115`) continue generating new stale-run eval issues despite prior duplicates being closed.
+
+## Scope
+Both agents (Founding Engineer + Code Reviewer) have identical ghost run patterns. Likely the same root cause: opencode_local adapter spawning ghost runs on system/timer invocations.

agents/cto/life/projects/code-reviewer-silent-runs/items.yaml

@@ -0,0 +1,51 @@
+- id: code-reviewer-silent-run-pattern
+  type: observation
+  status: superseded
+  superseded_by: fre-4952-fix
+  created: 2026-05-10
+  updated: 2026-05-10
+  summary: >
+    The Code Reviewer agent (f274248f, opencode_local adapter) generates
+    false-positive silent run detections on in_review issue assignments.
+    Paperclip creates a run at assignment time, but the local adapter
+    never auto-processes it. This has triggered 4 CTO escalations
+    (FRE-4946 through FRE-4949).
+  references:
+    - FRE-4949
+    - FRE-4952
+  evidence:
+    - 4 occurrences of same pattern
+    - 3 currently assigned in_review issues
+    - Each escalation consumes CTO heartbeat budget
+
+- id: fre-4952-fix
+  type: fix
+  status: done
+  created: 2026-05-10
+  updated: 2026-05-10
+  summary: >
+    Fixed Code Reviewer silent run pattern by adding in_review to the
+    heartbeat Get Assignments filter and clarifying review pickup in
+    AGENTS.md. Root cause was the heartbeat omitting in_review from
+    its status query — review tasks were invisible.
+  references:
+    - FRE-4952
+    - agents/code-reviewer/HEARTBEAT.md
+    - agents/code-reviewer/AGENTS.md
+  evidence:
+    - HEARTBEAT.md updated to include in_review in status filter
+    - AGENTS.md updated with review pickup instructions
+    - 3 stuck in_review issues addressed
+
+- id: fre-4695-ci-review
+  type: review
+  status: done
+  created: 2026-05-10
+  updated: 2026-05-10
+  summary: >
+    Reviewed CI workflow and test infrastructure for Pop project.
+    Found Go version matrix mismatch (1.21.x/1.22.x vs go.mod 1.23.0)
+    and fragile coverage calculation (grep -oP).
+  references:
+    - FRE-4695
+    - FRE-4951

agents/cto/life/projects/code-reviewer-silent-runs/summary.md

@@ -0,0 +1,25 @@
+# Code Reviewer Silent Run Pattern
+
+**Status**: Fixed (FRE-4952 done)
+
+## Problem
+
+The Code Reviewer's `opencode_local` adapter doesn't auto-process `in_review` assignments,
+generating false-positive silent run detections. 4 occurrences so far (FRE-4946–4949).
+
+## Root Cause
+
+Code Reviewer heartbeat Step 4 filtered `status=todo,in_progress,blocked` — explicitly
+omitting `in_review`. Review tasks were invisible even when the agent ran.
+
+## Fix (FRE-4952)
+
+1. **agents/code-reviewer/HEARTBEAT.md** — Added `in_review` to Get Assignments filter
+2. **agents/code-reviewer/AGENTS.md** — Clarified review pickup and silent run pattern
+3. 3 stuck `in_review` issues addressed: FRE-4695, FRE-4763, FRE-4737
+
+## Issues
+
+- FRE-4951: Fix Go version matrix in CI workflow (subtask of FRE-4695) — todo
+- FRE-4952: Code Reviewer silent run pattern ✅ **Done**
+- FRE-4954: May be superseded by FRE-4952 (same root cause)

agents/cto/life/projects/fre-4774-waitlist-migration/items.yaml

@@ -0,0 +1,42 @@
+facts:
+  - id: fre-4774-001
+    type: issue
+    summary: Production Turso DB had 0 tables — no migrations ever applied
+    details: Connected to libsql://scripter-mikefreno.aws-us-east-1.turso.io — sqlite_master was empty
+    date: 2026-05-04
+    status: resolved
+
+  - id: fre-4774-002
+    type: schema_gap
+    summary: waitlist_events table had no migration despite being in schema
+    details: Schema defined it but no CREATE TABLE existed in migrations 0000-0004
+    date: 2026-05-04
+    status: resolved
+
+  - id: fre-4774-003
+    type: schema_gap
+    summary: clerk_id column missing from users table
+    details: Schema defined text("clerk_id").notNull().unique() but no ALTER TABLE was in migrations
+    date: 2026-05-04
+    status: resolved
+
+  - id: fre-4774-004
+    type: bug
+    summary: Typo in migration 0004 — "statement-backpoint" instead of "statement-breakpoint"
+    details: Caused 2 CREATE INDEX statements to be concatenated, failing on SQL clients that reject multi-statement strings
+    date: 2026-05-04
+    status: resolved
+
+  - id: fre-4774-005
+    type: finding
+    summary: 8,742 waitlist subscriber claim not from production DB
+    details: Original marketing doc claimed 8,742 subs. Production DB was empty. CMO needs to locate source data.
+    date: 2026-05-04
+    status: confirmed
+
+  - id: fre-4774-006
+    type: migration
+    summary: Created migration 0005_perpetual_domino
+    details: Added clerk_id to users, created waitlist_events table. Applied to both dev and production.
+    date: 2026-05-04
+    status: resolved